From 15eb5e8812d53ce8d3e11efbb5cdee79964d82ec Mon Sep 17 00:00:00 2001
From: Julien Cornut <julien.cornut@hesge.ch>
Date: Thu, 25 Feb 2016 08:11:01 +0100
Subject: [PATCH] Automatic Update
---
ProcessFASTQ.ipynb | 13 ++++++++++---
1 file changed, 10 insertions(+), 3 deletions(-)
diff --git a/ProcessFASTQ.ipynb b/ProcessFASTQ.ipynb
index b05f509..3cd3a1b 100644
--- a/ProcessFASTQ.ipynb
+++ b/ProcessFASTQ.ipynb
@@ -95,7 +95,7 @@
},
{
"cell_type": "code",
- "execution_count": 74,
+ "execution_count": 77,
"metadata": {
"collapsed": false
},
@@ -107,6 +107,7 @@
"\n",
"Available files :\n",
"\n",
+ "{'', 'flowcell384_lane7_pair1_ACAGTG', 'flowcell261_lane8_pair1_TGACCA', 'testing-P', 'flowcell362_lane4_pair1_CAGATC', 'flowcell362_lane4_pair1_TGACCA', 'flowcell362_lane4_pair1_ACAGTG', 'flowcell261_lane8_pair1_CAGATC', 'testing-M', 'flowcell362_lane4_pair1_ACTTGA'}\n",
"Undetermined_lane7_pair1 \t\t Processsed\n",
"flowcell261_lane8_pair1_CAGATC \t\t Processsed\n",
"flowcell261_lane8_pair1_TGACCA \t\t Processsed\n",
@@ -160,8 +161,14 @@
"fn = {n.split('.')[0] for n in listdir(\"0-Raws/\")}\n",
"wn = {n.split('.')[0] for n in listdir(\"7-WIGs/\")}\n",
"\n",
- "lst = (n+\" \\t\\t Processsed\" \\\n",
- " if n+\".P.wig\" or n+\".M.wig\" in wn else n for n in sorted(fn))\n",
+ "print(wn)\n",
+ "\n",
+ "\n",
+ "\n",
+ "lst = (n+\" \\t\\t Processsed\" \\\n",
+ " if n+\".P.wig\" or n+\".M.wig\" in wn \\\n",
+ " else n \\\n",
+ " for n in sorted(fn))\n",
"\n",
"for l in lst:\n",
" print(l)\n",
--
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