diff --git a/ProcessFASTQ.ipynb b/ProcessFASTQ.ipynb index 9a9f23274feef42fdc90ccf94c10c45a283e34fb..e6c03651504773c16df7b5419bd11a973119175e 100644 --- a/ProcessFASTQ.ipynb +++ b/ProcessFASTQ.ipynb @@ -686,7 +686,7 @@ }, { "cell_type": "code", - "execution_count": 266, + "execution_count": 268, "metadata": { "collapsed": false }, @@ -719,8 +719,13 @@ " 'NGAGGACCGAACCGACTTACGTT',\n", " '#1=DDFFFGGHHHIIJIJIJJFH',\n", " 'XM:i:0\\n']\n", - "PRINT : SN279:493:C84L3ACXX:4:2309:1272:2215\n", + "\n", + "PRINT : \n", + "\n", + "SN279:493:C84L3ACXX:4:2309:1272:2215\n", "SN279:493:C84L3ACXX:4:2309:1272:2215:\t4\n", + "\n", + "\n", "ID: SN279:493:C84L3ACXX:4:2309:1309:2236\n", "Name: SN279:493:C84L3ACXX:4:2309:1309:2236\n", "Description: SN279:493:C84L3ACXX:4:2309:1309:2236 1:N:0:CAGATC\n", @@ -775,7 +780,7 @@ " seq_id = arr[0]\n", " flag = arr[1]\n", " if(flag=='4'):\n", - " print(\"PRINT : {0}\\n{1}:\\t{2}\".format(seq_id,record.id,flag))\n", + " print(\"\\nPRINT : \\n\\n{0}\\n{1}:\\t{2}\\n\\n\".format(seq_id,record.id,flag))\n", " seqiter.append(record)\n", " \n", " #print(\"{0}\\n{1}:\\t{2}\".format(seq_id,record.id,flag,))\n",