From 408629bebd736a3ce70d6097836f907810b10317 Mon Sep 17 00:00:00 2001
From: Julien Cornut <julien.cornut@hesge.ch>
Date: Fri, 26 Feb 2016 12:28:01 +0100
Subject: [PATCH] Automatic Update
---
ProcessFASTQ.ipynb | 11 ++++++++---
1 file changed, 8 insertions(+), 3 deletions(-)
diff --git a/ProcessFASTQ.ipynb b/ProcessFASTQ.ipynb
index 9a9f232..e6c0365 100644
--- a/ProcessFASTQ.ipynb
+++ b/ProcessFASTQ.ipynb
@@ -686,7 +686,7 @@
},
{
"cell_type": "code",
- "execution_count": 266,
+ "execution_count": 268,
"metadata": {
"collapsed": false
},
@@ -719,8 +719,13 @@
" 'NGAGGACCGAACCGACTTACGTT',\n",
" '#1=DDFFFGGHHHIIJIJIJJFH',\n",
" 'XM:i:0\\n']\n",
- "PRINT : SN279:493:C84L3ACXX:4:2309:1272:2215\n",
+ "\n",
+ "PRINT : \n",
+ "\n",
+ "SN279:493:C84L3ACXX:4:2309:1272:2215\n",
"SN279:493:C84L3ACXX:4:2309:1272:2215:\t4\n",
+ "\n",
+ "\n",
"ID: SN279:493:C84L3ACXX:4:2309:1309:2236\n",
"Name: SN279:493:C84L3ACXX:4:2309:1309:2236\n",
"Description: SN279:493:C84L3ACXX:4:2309:1309:2236 1:N:0:CAGATC\n",
@@ -775,7 +780,7 @@
" seq_id = arr[0]\n",
" flag = arr[1]\n",
" if(flag=='4'):\n",
- " print(\"PRINT : {0}\\n{1}:\\t{2}\".format(seq_id,record.id,flag))\n",
+ " print(\"\\nPRINT : \\n\\n{0}\\n{1}:\\t{2}\\n\\n\".format(seq_id,record.id,flag))\n",
" seqiter.append(record)\n",
" \n",
" #print(\"{0}\\n{1}:\\t{2}\".format(seq_id,record.id,flag,))\n",
--
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