diff --git a/ProcessFASTQ.ipynb b/ProcessFASTQ.ipynb index 4db4d05ba9d8b142cbe39a0fdaac925baf052b49..f0ffc575a52410445fc644c94614c3a548466339 100644 --- a/ProcessFASTQ.ipynb +++ b/ProcessFASTQ.ipynb @@ -683,7 +683,7 @@ }, { "cell_type": "code", - "execution_count": 253, + "execution_count": 254, "metadata": { "collapsed": false }, @@ -2726,7 +2726,9 @@ " arr = matches.readline().split('\\t')\n", " seq_id = arr[0]\n", " flag = arr[1]\n", - " print(\"{0}\\n{1}:\\t{2}\".format(seq_id,record.idflag,))\n", + " if(flag=='4'):\n", + " \n", + " print(\"{0}\\n{1}:\\t{2}\".format(seq_id,record.id,flag,))\n", " \n", "\n", " # Write back fastq\n",