From 96e4fde82ade1fff7c346912308a7f7558be6f82 Mon Sep 17 00:00:00 2001
From: Julien Cornut <julien.cornut@hesge.ch>
Date: Fri, 26 Feb 2016 12:14:01 +0100
Subject: [PATCH] Automatic Update
---
ProcessFASTQ.ipynb | 6 ++++--
1 file changed, 4 insertions(+), 2 deletions(-)
diff --git a/ProcessFASTQ.ipynb b/ProcessFASTQ.ipynb
index 4db4d05..f0ffc57 100644
--- a/ProcessFASTQ.ipynb
+++ b/ProcessFASTQ.ipynb
@@ -683,7 +683,7 @@
},
{
"cell_type": "code",
- "execution_count": 253,
+ "execution_count": 254,
"metadata": {
"collapsed": false
},
@@ -2726,7 +2726,9 @@
" arr = matches.readline().split('\\t')\n",
" seq_id = arr[0]\n",
" flag = arr[1]\n",
- " print(\"{0}\\n{1}:\\t{2}\".format(seq_id,record.idflag,))\n",
+ " if(flag=='4'):\n",
+ " \n",
+ " print(\"{0}\\n{1}:\\t{2}\".format(seq_id,record.id,flag,))\n",
" \n",
"\n",
" # Write back fastq\n",
--
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